Docs for 0.13.1
All versions

API Reference for skimage 0.13.1¶

Submodules¶

skimage
- color
- data
- draw
- exposure
- external
- feature
- filters
- future
- graph
- io
- measure
- morphology
- novice
- restoration
- segmentation
- transform
- util
- viewer

Submodule Contents¶

skimage
- Subpackages
- Utility Functions
- dtype_limits
- img_as_bool
- img_as_float
- img_as_int
- img_as_ubyte
- img_as_uint
- test
Module: color
- combine_stains
- convert_colorspace
- deltaE_cie76
- deltaE_ciede2000
- deltaE_ciede94
- deltaE_cmc
- gray2rgb
- grey2rgb
- guess_spatial_dimensions
- hed2rgb
- hsv2rgb
- lab2lch
- lab2rgb
- lab2xyz
- label2rgb
- lch2lab
- luv2rgb
- luv2xyz
- rgb2gray
- rgb2grey
- rgb2hed
- rgb2hsv
- rgb2lab
- rgb2luv
- rgb2rgbcie
- rgb2xyz
- rgb2ycbcr
- rgb2yiq
- rgb2ypbpr
- rgb2yuv
- rgba2rgb
- rgbcie2rgb
- separate_stains
- xyz2lab
- xyz2luv
- xyz2rgb
- ycbcr2rgb
- yiq2rgb
- ypbpr2rgb
- yuv2rgb
Module: data
- astronaut
- binary_blobs
- camera
- checkerboard
- chelsea
- clock
- coffee
- coins
- expected_warnings
- horse
- hubble_deep_field
- img_as_bool
- immunohistochemistry
- imread
- load
- logo
- moon
- page
- rocket
- stereo_motorcycle
- text
- use_plugin
Module: draw
- bezier_curve
- circle
- circle_perimeter
- circle_perimeter_aa
- ellipse
- ellipse_perimeter
- ellipsoid
- ellipsoid_stats
- line
- line_aa
- polygon
- polygon_perimeter
- set_color
Module: exposure
- adjust_gamma
- adjust_log
- adjust_sigmoid
- cumulative_distribution
- equalize_adapthist
- equalize_hist
- histogram
- is_low_contrast
- rescale_intensity
Module: external
Module: external.tifffile
- imread
- imsave
- imshow
- TiffFile
- TiffSequence
- TiffWriter
Module: feature
- blob_dog
- blob_doh
- blob_log
- canny
- corner_fast
- corner_foerstner
- corner_harris
- corner_kitchen_rosenfeld
- corner_moravec
- corner_orientations
- corner_peaks
- corner_shi_tomasi
- corner_subpix
- daisy
- draw_multiblock_lbp
- greycomatrix
- greycoprops
- hessian_matrix
- hessian_matrix_det
- hessian_matrix_eigvals
- hog
- local_binary_pattern
- match_descriptors
- match_template
- multiblock_lbp
- peak_local_max
- plot_matches
- register_translation
- shape_index
- structure_tensor
- structure_tensor_eigvals
- BRIEF
- CENSURE
- ORB
Module: filters
- copy_func
- frangi
- gabor
- gabor_filter
- gabor_kernel
- gaussian
- gaussian_filter
- hessian
- inverse
- laplace
- median
- prewitt
- prewitt_h
- prewitt_v
- rank_order
- roberts
- roberts_neg_diag
- roberts_pos_diag
- scharr
- scharr_h
- scharr_v
- sobel
- sobel_h
- sobel_v
- threshold_adaptive
- threshold_isodata
- threshold_li
- threshold_local
- threshold_mean
- threshold_minimum
- threshold_niblack
- threshold_otsu
- threshold_sauvola
- threshold_triangle
- threshold_yen
- try_all_threshold
- wiener
- LPIFilter2D
- deprecated
Module: filters.rank
- autolevel
- autolevel_percentile
- bottomhat
- enhance_contrast
- enhance_contrast_percentile
- entropy
- equalize
- geometric_mean
- gradient
- gradient_percentile
- maximum
- mean
- mean_bilateral
- mean_percentile
- median
- minimum
- modal
- noise_filter
- otsu
- percentile
- pop
- pop_bilateral
- pop_percentile
- subtract_mean
- subtract_mean_percentile
- sum
- sum_bilateral
- sum_percentile
- threshold
- threshold_percentile
- tophat
- windowed_histogram
Module: future
Module: future.graph
- cut_normalized
- cut_threshold
- merge_hierarchical
- ncut
- rag_boundary
- rag_mean_color
- show_rag
- RAG
Module: graph
- route_through_array
- shortest_path
- MCP
- MCP_Connect
- MCP_Flexible
- MCP_Geometric
Module: io
- call_plugin
- concatenate_images
- find_available_plugins
- imread
- imread_collection
- imread_collection_wrapper
- imsave
- imshow
- imshow_collection
- load_sift
- load_surf
- plugin_info
- plugin_order
- pop
- push
- reset_plugins
- show
- use_plugin
- ImageCollection
- MultiImage
Module: measure
- approximate_polygon
- block_reduce
- compare_mse
- compare_nrmse
- compare_psnr
- compare_ssim
- correct_mesh_orientation
- find_contours
- grid_points_in_poly
- label
- marching_cubes
- marching_cubes_classic
- marching_cubes_lewiner
- mesh_surface_area
- moments
- moments_central
- moments_hu
- moments_normalized
- perimeter
- points_in_poly
- profile_line
- ransac
- regionprops
- shannon_entropy
- structural_similarity
- subdivide_polygon
- CircleModel
- EllipseModel
- LineModel
- LineModelND
Module: morphology
- ball
- binary_closing
- binary_dilation
- binary_erosion
- binary_opening
- black_tophat
- closing
- convex_hull_image
- convex_hull_object
- cube
- diamond
- dilation
- disk
- erosion
- h_maxima
- h_minima
- label
- local_maxima
- local_minima
- medial_axis
- octagon
- octahedron
- opening
- reconstruction
- rectangle
- remove_small_holes
- remove_small_objects
- skeletonize
- skeletonize_3d
- square
- star
- thin
- watershed
- white_tophat
Module: novice
- skimage.novice
  - Description
  - Examples
- open
- Picture
Module: restoration
- denoise_bilateral
- denoise_nl_means
- denoise_tv_bregman
- denoise_tv_chambolle
- denoise_wavelet
- estimate_sigma
- inpaint_biharmonic
- nl_means_denoising
- richardson_lucy
- unsupervised_wiener
- unwrap_phase
- wiener
Module: segmentation
- active_contour
- clear_border
- felzenszwalb
- find_boundaries
- join_segmentations
- mark_boundaries
- quickshift
- random_walker
- relabel_from_one
- relabel_sequential
- slic
- watershed
Module: transform
- downscale_local_mean
- estimate_transform
- frt2
- hough_circle
- hough_circle_peaks
- hough_ellipse
- hough_line
- hough_line_peaks
- ifrt2
- integral_image
- integrate
- iradon
- iradon_sart
- matrix_transform
- order_angles_golden_ratio
- probabilistic_hough_line
- pyramid_expand
- pyramid_gaussian
- pyramid_laplacian
- pyramid_reduce
- radon
- rescale
- resize
- rotate
- seam_carve
- swirl
- warp
- warp_coords
- AffineTransform
- EssentialMatrixTransform
- EuclideanTransform
- FundamentalMatrixTransform
- PiecewiseAffineTransform
- PolynomialTransform
- ProjectiveTransform
- SimilarityTransform
Module: util
- apply_parallel
- copy_func
- crop
- dtype_limits
- img_as_bool
- img_as_float
- img_as_int
- img_as_ubyte
- img_as_uint
- invert
- numpy_pad
- pad
- random_noise
- regular_grid
- regular_seeds
- unique_rows
- view_as_blocks
- view_as_windows
Module: viewer
- warn
- CollectionViewer
- ImageViewer
Module: viewer.canvastools
- LineTool
- PaintTool
- RectangleTool
- ThickLineTool
Module: viewer.plugins
- CannyPlugin
- ColorHistogram
- Crop
- LabelPainter
- LineProfile
- Measure
- OverlayPlugin
- PlotPlugin
- Plugin
Module: viewer.utils
- figimage
- init_qtapp
- new_plot
- start_qtapp
- update_axes_image
- ClearColormap
- FigureCanvas
- LinearColormap
- RequiredAttr
Module: viewer.viewers
- CollectionViewer
- ImageViewer
Module: viewer.widgets
- BaseWidget
- Button
- CheckBox
- ComboBox
- OKCancelButtons
- SaveButtons
- Slider
- Text